Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005537annotation not available (81 aa)    
Predicted Functional Partners:
RBX1
Ring-box 1.
    
 0.964
CUL1
Cullin 1.
   
 0.962
CUL5
Cullin 5.
   
 0.957
ENSCAPP00000001874
annotation not available
    
 0.954
CUL3
Cullin 3.
   
 0.953
CUL4A
Cullin 4A.
    
 0.952
CUL2
Cullin 2.
   
 0.946
CAND1
Cullin associated and neddylation dissociated 1.
    
 0.924
ENSCAPP00000001066
annotation not available
    
 0.918
ENSCAPP00000009519
annotation not available
    
 0.916
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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