STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMPD1FERM and PDZ domain containing 1. (1340 aa)    
Predicted Functional Partners:
ENSCAPP00000003238
annotation not available
    
 
 0.960
LRIT1
Leucine rich repeat, Ig-like and transmembrane domains 1.
    
 
 0.876
GPSM1
G protein signaling modulator 1.
    
 
 0.874
ARL3
ADP ribosylation factor like GTPase 3.
    
 
 0.781
FBXO10
F-box protein 10.
    
 
 0.705
TMEM51
Transmembrane protein 51.
      
 0.689
SPATS2L
Spermatogenesis associated serine rich 2 like.
      
 0.688
ENSCAPP00000009857
annotation not available
      
 0.676
SLC2A13
Solute carrier family 2 member 13.
      
 0.667
NCALD
Neurocalcin delta.
      
 0.652
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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