STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005542annotation not available (222 aa)    
Predicted Functional Partners:
MTA2
Metastasis associated 1 family member 2.
   
 0.999
MTA1
Metastasis associated 1.
   
 0.999
GATAD2B
GATA zinc finger domain containing 2B.
   
 0.998
CHD3
Chromodomain helicase DNA binding protein 3.
   
 0.998
GATAD2A
GATA zinc finger domain containing 2A.
   
 0.998
HDAC1
Histone deacetylase 1.
   
 0.998
HDAC2
Histone deacetylase 2.
   
 0.998
CDK2AP1
Cyclin dependent kinase 2 associated protein 1.
    
 0.996
ENSCAPP00000002180
annotation not available
   
 0.986
ENSCAPP00000015653
annotation not available
   
 0.986
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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