Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005544annotation not available (748 aa)    
Predicted Functional Partners:
ENSCAPP00000005688
annotation not available
    
 0.845
RAB8A
RAB8A, member RAS oncogene family.
    
 0.842
RAB10
RAB10, member RAS oncogene family.
    
 0.822
RAB8B
RAB8B, member RAS oncogene family.
    
 0.750
ENSCAPP00000008920
annotation not available
    
  0.713
RAB15
RAB15, member RAS oncogene family.
    
 0.709
ENSCAPP00000000758
annotation not available
    
 0.686
GAREM1
GRB2 associated regulator of MAPK1 subtype 1.
    
 0.686
ENSCAPP00000001745
annotation not available
      
 0.679
RAB7A
RAB7A, member RAS oncogene family.
    
 0.646
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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