Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005550annotation not available (1130 aa)    
Predicted Functional Partners:
CLIP1
CAP-Gly domain containing linker protein 1.
    
 0.992
CLASP1
Cytoplasmic linker associated protein 1.
   
 
 0.987
ENSCAPP00000009621
annotation not available
    
 0.964
ENSCAPP00000012568
annotation not available
    
 0.964
CLIP2
CAP-Gly domain containing linker protein 2.
    
 0.961
PLK1
Polo like kinase 1.
    
 0.957
NUDC
Nuclear distribution C, dynein complex regulator.
     
 0.952
ENSCAPP00000013943
annotation not available
    
 0.952
ENSCAPP00000008774
annotation not available
    
 
 0.924
CKAP5
Cytoskeleton associated protein 5.
   
 0.921
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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