STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005550annotation not available (1130 aa)    
Predicted Functional Partners:
NUDC
Nuclear distribution C, dynein complex regulator.
     
 0.813
CLIP1
CAP-Gly domain containing linker protein 1.
    
 
 0.777
PLK1
Polo like kinase 1.
    
 0.749
BUB3
BUB3 mitotic checkpoint protein.
    
 0.742
CLIP2
CAP-Gly domain containing linker protein 2.
    
 
 0.708
CDC20
Cell division cycle 20.
     
 0.707
ENSCAPP00000009621
annotation not available
    
 
 0.663
ENSCAPP00000012568
annotation not available
    
 
 0.663
BUB1
BUB1 mitotic checkpoint serine/threonine kinase.
     
 0.645
PLK3
Polo like kinase 3.
    
 0.641
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.