Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
STK11IPSerine/threonine kinase 11 interacting protein. (1045 aa)    
Predicted Functional Partners:
ENSCAPP00000000893
annotation not available
      
 0.721
NAA10
N(alpha)-acetyltransferase 10, NatA catalytic subunit.
     
  0.613
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
   
  
 0.593
STK11
Serine/threonine kinase 11.
    
 
 0.571
ENSCAPP00000010034
annotation not available
      
 0.570
TMUB2
Transmembrane and ubiquitin like domain containing 2.
      
 0.567
ENSCAPP00000008456
annotation not available
      
 0.549
ENSCAPP00000002046
annotation not available
      
 0.530
UAP1L1
UDP-N-acetylglucosamine pyrophosphorylase 1 like 1.
      
 0.514
GMIP
GEM interacting protein.
   
  
 0.475
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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