Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005560annotation not available (115 aa)    
Predicted Functional Partners:
MITF
Melanocyte inducing transcription factor.
   
 0.982
TFEB
Transcription factor EB.
   
  0.969
TFEC
Transcription factor EC.
 
 
 0.940
ENSCAPP00000008370
annotation not available
      
 0.899
MAPK7
Mitogen-activated protein kinase 7.
    
 0.854
MAPK3
Mitogen-activated protein kinase 3.
    
 0.854
KIT
KIT proto-oncogene, receptor tyrosine kinase.
   
 0.850
SUMO1
Small ubiquitin like modifier 1.
    
 0.847
MTOR
Mechanistic target of rapamycin kinase.
    
 
 0.837
LEF1
Lymphoid enhancer binding factor 1.
    
 0.799
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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