STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005567annotation not available (434 aa)    
Predicted Functional Partners:
ABCE1
ATP binding cassette subfamily E member 1.
   
 
 0.966
ACAD9
acyl-CoA dehydrogenase family member 9.
  
   0.929
ENSCAPP00000014228
annotation not available
  
 
 0.927
RPL10A
Ribosomal protein L10a.
   
 
 0.916
ENSCAPP00000018144
annotation not available
  
 
 0.868
EEF1G
Eukaryotic translation elongation factor 1 gamma.
   
 
 0.863
GNL1
G protein nucleolar 1 (putative).
  
 
 0.858
RPL5
Ribosomal protein L5.
  
   0.816
ENSCAPP00000001007
annotation not available
   
 
 0.814
ATP6V1H
ATPase H+ transporting V1 subunit H.
    
  0.806
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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