Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CNN1Calponin 1. (257 aa)    
Predicted Functional Partners:
MYH11
Myosin heavy chain 11.
   
 
 0.953
ACTG2
Actin gamma 2, smooth muscle.
   
 0.947
ENSCAPP00000014267
annotation not available
      
 0.941
TAGLN
Transgelin.
   
 
 0.874
WDR90
WD repeat domain 90.
    
 
 0.823
LMOD1
Leiomodin 1.
   
 
 0.804
PARP10
poly(ADP-ribose) polymerase family member 10.
    
 
 0.804
ACTA2
Actin alpha 2, smooth muscle.
   
 0.796
CALB2
Calbindin 2.
    
 0.779
PRELP
Proline and arginine rich end leucine rich repeat protein.
   
 
 0.745
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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