STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LGSNLengsin, lens protein with glutamine synthetase domain. (561 aa)    
Predicted Functional Partners:
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
    
 0.968
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 0.935
ENSCAPP00000004078
annotation not available
  
 
 0.916
GLUL
Glutamate-ammonia ligase.
     
 0.908
GMPS
Guanine monophosphate synthase.
    
 0.896
PPAT
Phosphoribosyl pyrophosphate amidotransferase.
    
 0.893
AIFM3
Apoptosis inducing factor mitochondria associated 3.
  
 
 0.891
GLDC
Glycine decarboxylase.
   
 
 0.883
TMEM109
Transmembrane protein 109.
     
 0.877
PC
Pyruvate carboxylase.
     
 0.871
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.