Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
LGSNLengsin, lens protein with glutamine synthetase domain. (561 aa)    
Predicted Functional Partners:
GLUL
Glutamate-ammonia ligase.
     
 0.949
ALDH18A1
Aldehyde dehydrogenase 18 family member A1.
    
 0.948
ENSCAPP00000004078
annotation not available
  
 
 0.917
EPRS1
glutamyl-prolyl-tRNA synthetase 1.
   
 0.898
LENEP
Lens epithelial protein.
      
 0.895
PPAT
Phosphoribosyl pyrophosphate amidotransferase.
    
 0.884
ALDH4A1
Aldehyde dehydrogenase 4 family member A1.
  
 
 0.863
ENSCAPP00000009451
annotation not available
    
 0.860
GLDC
Glycine decarboxylase.
   
 
 0.859
AGMAT
Agmatinase.
    
 0.845
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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