Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HAO1Hydroxyacid oxidase 1. (370 aa)    
Predicted Functional Partners:
AGXT
Alanine--glyoxylate and serine--pyruvate aminotransferase.
  
 0.979
DAO
D-amino acid oxidase.
  
 
 0.971
GRHPR
Glyoxylate and hydroxypyruvate reductase.
  
 
 0.969
KCNAB2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
   
 
 0.962
AGXT2
Alanine--glyoxylate aminotransferase 2.
   
 
 0.941
CAT
Catalase.
   
 
 0.940
LDHD
Lactate dehydrogenase D.
  
 0.940
ENSCAPP00000009029
annotation not available
    
   0.926
ENSCAPP00000013843
annotation not available
    
   0.926
ENSCAPP00000012217
annotation not available
  
 
 0.914
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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