Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MTERF3Mitochondrial transcription termination factor 3. (398 aa)    
Predicted Functional Partners:
FASTKD2
FAST kinase domains 2.
   
 0.990
TRUB2
TruB pseudouridine synthase family member 2.
   
 0.956
ENSCAPP00000014249
annotation not available
   
 
 0.941
RCC1L
RCC1 like.
    
  0.934
UQCRC2
Ubiquinol-cytochrome c reductase core protein 2.
     
 0.858
RPUSD4
RNA pseudouridine synthase D4.
   
 0.851
HTT
Huntingtin.
    
  0.841
UQCRC1
Ubiquinol-cytochrome c reductase core protein 1.
     
  0.840
ENSCAPP00000006834
annotation not available
     
  0.840
ENSCAPP00000010627
annotation not available
     
  0.840
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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