STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MTERF3Mitochondrial transcription termination factor 3. (398 aa)    
Predicted Functional Partners:
FASTKD2
FAST kinase domains 2.
   
 
 0.805
ENSCAPP00000011016
annotation not available
     
 0.804
GOSR1
Golgi SNAP receptor complex member 1.
     
 0.801
STX5
Syntaxin 5.
     
 0.799
ENSCAPP00000007108
annotation not available
    
   0.759
RPL23A
Ribosomal protein L23a.
    
   0.759
MRRF
Mitochondrial ribosome recycling factor.
    
 
 0.699
MRPL19
Mitochondrial ribosomal protein L19.
   
 
 0.699
MFN1
Mitofusin 1.
     
 0.695
MRPL4
Mitochondrial ribosomal protein L4.
    
   0.680
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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