STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FRMPD4FERM and PDZ domain containing 4. (1116 aa)    
Predicted Functional Partners:
ENSCAPP00000003238
annotation not available
    
 
 0.843
GPSM1
G protein signaling modulator 1.
    
 
 0.548
LRFN5
Leucine rich repeat and fibronectin type III domain containing 5.
   
  
 0.533
EXOSC10
Exosome component 10.
      
 0.518
ILF3
Interleukin enhancer binding factor 3.
      
 0.518
DDX39B
DExD-box helicase 39B.
      
 0.518
TTC29
Tetratricopeptide repeat domain 29.
    
 
 0.506
PCP2
Purkinje cell protein 2.
    
 
 0.506
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.