Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FRMPD4FERM and PDZ domain containing 4. (1116 aa)    
Predicted Functional Partners:
ENSCAPP00000003238
annotation not available
    
 
 0.937
ENSCAPP00000002021
annotation not available
      
 0.660
FAM204A
Family with sequence similarity 204 member A.
   
    0.633
GPSM1
G protein signaling modulator 1.
    
 
 0.533
PTGFRN
Prostaglandin F2 receptor inhibitor.
  
   
 0.449
OSBPL10
Oxysterol binding protein like 10.
      
 0.449
CLCN6
Chloride voltage-gated channel 6.
      
 0.436
CENPF
Centromere protein F.
      
 0.435
PARD3B
Par-3 family cell polarity regulator beta.
      
 0.402
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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