STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005589annotation not available (92 aa)    
Predicted Functional Partners:
ENSCAPP00000001161
annotation not available
   
 0.984
SNRPD1
Small nuclear ribonucleoprotein D1 polypeptide.
   
 0.977
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
   
 0.964
PHF5A
PHD finger protein 5A.
   
 0.929
ENSCAPP00000003884
annotation not available
   
 0.924
ENSCAPP00000010418
annotation not available
   
 0.924
SNRPN
Small nuclear ribonucleoprotein polypeptide N.
   
 0.923
ENSCAPP00000010480
annotation not available
   
 0.920
ENSCAPP00000016568
annotation not available
   
 0.920
SNRPC
Small nuclear ribonucleoprotein polypeptide C.
   
 0.915
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.