Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005599annotation not available (76 aa)    
Predicted Functional Partners:
RCVRN
Recoverin.
    
   0.803
ENSCAPP00000011856
annotation not available
   
 0.713
HSPA5
Heat shock protein family A (Hsp70) member 5.
   
  0.659
HSPA4
Heat shock protein family A (Hsp70) member 4.
   
 0.654
DNAJB5
DnaJ heat shock protein family (Hsp40) member B5.
   
 0.644
HSPA14
Heat shock protein family A (Hsp70) member 14.
   
 0.638
ENSCAPP00000012553
annotation not available
   
 0.620
HSPA12A
Heat shock protein family A (Hsp70) member 12A.
   
 0.620
HSPA1L
Heat shock protein family A (Hsp70) member 1 like.
   
 0.615
HSPA6
Heat shock protein family A (Hsp70) member 6.
   
 0.611
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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