ENSCAPP00000005608 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

ENSCAPP00000005608

annotation not available (108 aa)

Predicted Functional Partners:

TECTA

0.724

ENSCAPP00000000546

0.599

NRXN2

0.599

ENSCAPP00000009286

0.599

NRXN3

0.599

GRID2

0.590

GRID1

0.590

ENSCAPP00000012033

0.590

NTNG2

0.568

NWD2

0.564

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000000546	ENSCAPP00000005608	ENSCAPP00000000546	ENSCAPP00000005608	annotation not available	annotation not available	0.599
ENSCAPP00000000546	ENSCAPP00000009286	ENSCAPP00000000546	ENSCAPP00000009286	annotation not available	annotation not available	0.891
ENSCAPP00000000546	ENSCAPP00000012033	ENSCAPP00000000546	ENSCAPP00000012033	annotation not available	annotation not available	0.597
ENSCAPP00000000546	GRID1	ENSCAPP00000000546	ENSCAPP00000003790	annotation not available	Glutamate ionotropic receptor delta type subunit 1.	0.755
ENSCAPP00000000546	GRID2	ENSCAPP00000000546	ENSCAPP00000003615	annotation not available	Glutamate ionotropic receptor delta type subunit 2.	0.597
ENSCAPP00000000546	NRXN2	ENSCAPP00000000546	ENSCAPP00000006163	annotation not available	Neurexin 2.	0.987
ENSCAPP00000005608	ENSCAPP00000000546	ENSCAPP00000005608	ENSCAPP00000000546	annotation not available	annotation not available	0.599
ENSCAPP00000005608	ENSCAPP00000009286	ENSCAPP00000005608	ENSCAPP00000009286	annotation not available	annotation not available	0.599
ENSCAPP00000005608	ENSCAPP00000012033	ENSCAPP00000005608	ENSCAPP00000012033	annotation not available	annotation not available	0.590
ENSCAPP00000005608	GRID1	ENSCAPP00000005608	ENSCAPP00000003790	annotation not available	Glutamate ionotropic receptor delta type subunit 1.	0.590
ENSCAPP00000005608	GRID2	ENSCAPP00000005608	ENSCAPP00000003615	annotation not available	Glutamate ionotropic receptor delta type subunit 2.	0.590
ENSCAPP00000005608	NRXN2	ENSCAPP00000005608	ENSCAPP00000006163	annotation not available	Neurexin 2.	0.599
ENSCAPP00000005608	NRXN3	ENSCAPP00000005608	ENSCAPP00000017116	annotation not available	Neurexin 3.	0.599
ENSCAPP00000005608	NTNG2	ENSCAPP00000005608	ENSCAPP00000017860	annotation not available	Netrin G2.	0.568
ENSCAPP00000005608	NWD2	ENSCAPP00000005608	ENSCAPP00000009543	annotation not available	NACHT and WD repeat domain containing 2.	0.564
ENSCAPP00000005608	TECTA	ENSCAPP00000005608	ENSCAPP00000008681	annotation not available	Tectorin alpha.	0.724
ENSCAPP00000009286	ENSCAPP00000000546	ENSCAPP00000009286	ENSCAPP00000000546	annotation not available	annotation not available	0.891
ENSCAPP00000009286	ENSCAPP00000005608	ENSCAPP00000009286	ENSCAPP00000005608	annotation not available	annotation not available	0.599
ENSCAPP00000009286	ENSCAPP00000012033	ENSCAPP00000009286	ENSCAPP00000012033	annotation not available	annotation not available	0.773
ENSCAPP00000009286	GRID1	ENSCAPP00000009286	ENSCAPP00000003790	annotation not available	Glutamate ionotropic receptor delta type subunit 1.	0.874