Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RARBRetinoic acid receptor beta. (412 aa)    
Predicted Functional Partners:
RXRA
Retinoid X receptor alpha.
   
 0.996
RXRB
Retinoid X receptor beta.
   
 0.996
RXRG
Retinoid X receptor gamma.
   
 0.993
MED1
Mediator complex subunit 1.
    
  0.937
RARA
Retinoic acid receptor alpha.
   
 0.928
NCOA1
Nuclear receptor coactivator 1.
    
 0.919
ZBTB16
Zinc finger and BTB domain containing 16.
    
 0.895
NCOR2
Nuclear receptor corepressor 2.
    
 0.883
RARS1
arginyl-tRNA synthetase 1.
    
 
 0.882
RARG
Retinoic acid receptor gamma.
   
 0.880
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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