STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RARBRetinoic acid receptor beta. (412 aa)    
Predicted Functional Partners:
RXRA
Retinoid X receptor alpha.
   
0.987
NCOA1
Nuclear receptor coactivator 1.
    
 0.955
RXRB
Retinoid X receptor beta.
   
0.940
RARA
Retinoic acid receptor alpha.
  
 
0.937
RXRG
Retinoid X receptor gamma.
   
0.928
MED1
Mediator complex subunit 1.
    
 0.915
ENSCAPP00000011708
annotation not available
    
 0.786
ENSCAPP00000013862
annotation not available
    
 0.786
NCOR2
Nuclear receptor corepressor 2.
    
 0.771
CRABP2
Cellular retinoic acid binding protein 2.
    
 0.763
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.