Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005614annotation not available (361 aa)    
Predicted Functional Partners:
ENSCAPP00000004616
annotation not available
    
 0.999
TCIRG1
T cell immune regulator 1, ATPase H+ transporting V0 subunit a3.
  
 
 0.892
RNF13
Ring finger protein 13.
    
   0.848
PLEKHM1
Pleckstrin homology and RUN domain containing M1.
      
 0.739
GPAA1
Glycosylphosphatidylinositol anchor attachment 1.
   
  
 0.699
TEPSIN
TEPSIN adaptor related protein complex 4 accessory protein.
      
 0.669
GPR162
G protein-coupled receptor 162.
      
 0.668
RNF167
Ring finger protein 167.
    
   0.641
C19orf54
Chromosome 19 open reading frame 54.
      
 0.640
LMBRD1
LMBR1 domain containing 1.
      
 0.625
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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