STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
MMP15Matrix metallopeptidase 15. (637 aa)    
Predicted Functional Partners:
TIMP2
TIMP metallopeptidase inhibitor 2.
    
 0.982
HBEGF
Heparin binding EGF like growth factor.
    
 0.922
GNAI3
G protein subunit alpha i3.
     
  0.911
ENSCAPP00000011373
annotation not available
     
  0.911
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.866
PCSK4
Proprotein convertase subtilisin/kexin type 4.
    
 0.861
FURIN
Furin, paired basic amino acid cleaving enzyme.
    
 0.861
FBN1
Fibrillin 1.
    
 0.849
FBN2
Fibrillin 2.
    
 0.800
GNAI1
G protein subunit alpha i1.
     
  0.765
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.