STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMP15Matrix metallopeptidase 15. (637 aa)    
Predicted Functional Partners:
TIMP2
TIMP metallopeptidase inhibitor 2.
    
 0.945
TIMP3
TIMP metallopeptidase inhibitor 3.
   
 0.869
HBEGF
Heparin binding EGF like growth factor.
    
 0.818
GNAI3
G protein subunit alpha i3.
     
 0.800
ENSCAPP00000011373
annotation not available
     
 0.800
TNC
Tenascin C.
   
 0.697
TNR
Tenascin R.
    
 0.695
TNN
Tenascin N.
    
 0.695
PCSK4
Proprotein convertase subtilisin/kexin type 4.
    
 0.683
FURIN
Furin, paired basic amino acid cleaving enzyme.
    
 0.683
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.