STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYOTMyotilin. (489 aa)    
Predicted Functional Partners:
CCDC25
Coiled-coil domain containing 25.
    
 0.774
PKDREJ
Polycystin family receptor for egg jelly.
    
 0.761
PKD1
Polycystin 1, transient receptor potential channel interacting.
    
 0.761
ACTN2
Actinin alpha 2.
   
 
 0.694
ACTN3
Actinin alpha 3 (gene/pseudogene).
   
 
 0.668
FLNC
Filamin C.
    
 
 0.644
MYOZ2
Myozenin 2.
   
  
 0.631
EXOC5
Exocyst complex component 5.
     
 0.617
TCAP
Titin-cap.
   
  
 0.598
BAG3
BCL2 associated athanogene 3.
    
 
 0.594
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.