Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CEP290Centrosomal protein 290. (1998 aa)    
Predicted Functional Partners:
ENSCAPP00000007341
annotation not available
   
 0.996
CEP76
Centrosomal protein 76.
    
 0.986
PCM1
Pericentriolar material 1.
   
 
 0.979
RAB8A
RAB8A, member RAS oncogene family.
    
 0.976
ENSCAPP00000007041
annotation not available
    
 0.975
CC2D2A
Coiled-coil and C2 domain containing 2A.
   
 0.974
TMEM67
Transmembrane protein 67.
     
 0.969
LAP3
Leucine aminopeptidase 3.
    
 0.969
MKS1
MKS transition zone complex subunit 1.
    
 0.967
TMEM231
Transmembrane protein 231.
     
 0.961
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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