STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CD40LGCD40 ligand. (225 aa)    
Predicted Functional Partners:
ICOS
Inducible T cell costimulator.
   
 
 0.970
CD40
CD40 molecule.
   
 0.963
ENSCAPP00000007086
annotation not available
   
 0.862
LTBR
Lymphotoxin beta receptor.
    
 0.847
TNC
Tenascin C.
    
   0.843
TNFRSF11B
TNF receptor superfamily member 11b.
    
 0.828
ENSCAPP00000014176
annotation not available
    
 0.828
TNR
Tenascin R.
    
   0.821
TNN
Tenascin N.
    
   0.821
TNFRSF13C
TNF receptor superfamily member 13C.
     
 0.810
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.