ENSCAPP00000005658 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

ENSCAPP00000005658

annotation not available (760 aa)

Predicted Functional Partners:

PIP5K1C

0.923

ENSCAPP00000015905

0.916

SRC

0.855

ENSCAPP00000013530

0.855

ENSCAPP00000009712

0.854

ENSCAPP00000013934

0.854

ENSCAPP00000005187

0.848

ENSCAPP00000007609

0.848

ENSCAPP00000015123

0.848

NRP1

0.833

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

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structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

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node degree of proteins in your network (given the current score cut-off)

... network coordinates:

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000005187	ENSCAPP00000005658	ENSCAPP00000005187	ENSCAPP00000005658	annotation not available	annotation not available	0.848
ENSCAPP00000005187	ENSCAPP00000009712	ENSCAPP00000005187	ENSCAPP00000009712	annotation not available	annotation not available	0.692
ENSCAPP00000005187	ENSCAPP00000013530	ENSCAPP00000005187	ENSCAPP00000013530	annotation not available	annotation not available	0.784
ENSCAPP00000005187	ENSCAPP00000013934	ENSCAPP00000005187	ENSCAPP00000013934	annotation not available	annotation not available	0.692
ENSCAPP00000005187	ENSCAPP00000015905	ENSCAPP00000005187	ENSCAPP00000015905	annotation not available	annotation not available	0.996
ENSCAPP00000005187	SRC	ENSCAPP00000005187	ENSCAPP00000004263	annotation not available	SRC proto-oncogene, non-receptor tyrosine kinase.	0.784
ENSCAPP00000005658	ENSCAPP00000005187	ENSCAPP00000005658	ENSCAPP00000005187	annotation not available	annotation not available	0.848
ENSCAPP00000005658	ENSCAPP00000007609	ENSCAPP00000005658	ENSCAPP00000007609	annotation not available	annotation not available	0.848
ENSCAPP00000005658	ENSCAPP00000009712	ENSCAPP00000005658	ENSCAPP00000009712	annotation not available	annotation not available	0.854
ENSCAPP00000005658	ENSCAPP00000013530	ENSCAPP00000005658	ENSCAPP00000013530	annotation not available	annotation not available	0.855
ENSCAPP00000005658	ENSCAPP00000013934	ENSCAPP00000005658	ENSCAPP00000013934	annotation not available	annotation not available	0.854
ENSCAPP00000005658	ENSCAPP00000015123	ENSCAPP00000005658	ENSCAPP00000015123	annotation not available	annotation not available	0.848
ENSCAPP00000005658	ENSCAPP00000015905	ENSCAPP00000005658	ENSCAPP00000015905	annotation not available	annotation not available	0.916
ENSCAPP00000005658	NRP1	ENSCAPP00000005658	ENSCAPP00000002872	annotation not available	Neuropilin 1.	0.833
ENSCAPP00000005658	PIP5K1C	ENSCAPP00000005658	ENSCAPP00000004784	annotation not available	Phosphatidylinositol-4-phosphate 5-kinase type 1 gamma.	0.923
ENSCAPP00000005658	SRC	ENSCAPP00000005658	ENSCAPP00000004263	annotation not available	SRC proto-oncogene, non-receptor tyrosine kinase.	0.855
ENSCAPP00000007609	ENSCAPP00000005658	ENSCAPP00000007609	ENSCAPP00000005658	annotation not available	annotation not available	0.848
ENSCAPP00000007609	ENSCAPP00000009712	ENSCAPP00000007609	ENSCAPP00000009712	annotation not available	annotation not available	0.692
ENSCAPP00000007609	ENSCAPP00000013530	ENSCAPP00000007609	ENSCAPP00000013530	annotation not available	annotation not available	0.784
ENSCAPP00000007609	ENSCAPP00000013934	ENSCAPP00000007609	ENSCAPP00000013934	annotation not available	annotation not available	0.692