Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005662annotation not available (99 aa)    
Predicted Functional Partners:
ENSCAPP00000006888
annotation not available
    
   0.833
ARAP3
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3.
      
 0.689
GATA3
GATA binding protein 3.
    
 0.658
ARSG
Arylsulfatase G.
    
 0.589
TRIM28
Tripartite motif containing 28.
    
 0.582
CCNJL
Cyclin J like.
    
 0.560
MYSM1
Myb like, SWIRM and MPN domains 1.
    
  0.556
ENSCAPP00000015159
annotation not available
      
 0.556
PHYKPL
5-phosphohydroxy-L-lysine phospho-lyase.
      
 0.549
CCDC88A
Coiled-coil domain containing 88A.
      
 0.535
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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