STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPH3ALRabphilin 3A like (without C2 domains). (311 aa)    
Predicted Functional Partners:
DOC2B
Double C2 domain beta.
 
    
 0.908
RAB3A
RAB3A, member RAS oncogene family.
   
 
 0.750
SYT10
Synaptotagmin 10.
 
 
 
 0.639
RAB27A
RAB27A, member RAS oncogene family.
    
 
 0.636
SNAP25
Synaptosome associated protein 25.
   
 
 0.565
RAB3B
RAB3B, member RAS oncogene family.
   
 
 0.562
RAB3C
RAB3C, member RAS oncogene family.
   
 
 0.562
ENSCAPP00000002771
annotation not available
   
 
 0.561
DOC2A
Double C2 domain alpha.
 
    
 0.560
AFAP1L1
Actin filament associated protein 1 like 1.
      
 0.558
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.