STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AP5Z1Adaptor related protein complex 5 subunit zeta 1. (792 aa)    
Predicted Functional Partners:
AP5M1
Adaptor related protein complex 5 subunit mu 1.
    
 0.996
AP5S1
Adaptor related protein complex 5 subunit sigma 1.
    
 0.991
SPG11
SPG11 vesicle trafficking associated, spatacsin.
    
 
 0.984
AP4M1
Adaptor related protein complex 4 subunit mu 1.
    
 0.969
ENSCAPP00000000647
annotation not available
    
 0.961
VPS39
VPS39 subunit of HOPS complex.
    
 0.961
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
     
 0.961
AP1G2
Adaptor related protein complex 1 subunit gamma 2.
     
 0.957
AP4S1
Adaptor related protein complex 4 subunit sigma 1.
     
 0.955
AP3S1
Adaptor related protein complex 3 subunit sigma 1.
     
 0.953
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.