Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005674annotation not available (331 aa)    
Predicted Functional Partners:
SLC6A9
Solute carrier family 6 member 9.
     
  0.911
ENSCAPP00000015859
annotation not available
 
  
  0.878
GLRA1
Glycine receptor alpha 1.
   
  
 0.851
SLC1A6
Solute carrier family 1 member 6.
  
 
 0.804
SLC1A3
Solute carrier family 1 member 3.
    
 0.784
SLC1A7
Solute carrier family 1 member 7.
    
 0.770
GLRB
Glycine receptor beta.
      
 0.747
SLC6A4
Solute carrier family 6 member 4.
     
 0.724
SLC6A1
Solute carrier family 6 member 1.
   
 
  0.713
SLC6A3
Solute carrier family 6 member 3.
     
  0.708
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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