Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CLEC1AC-type lectin domain family 1 member A. (208 aa)    
Predicted Functional Partners:
SYK
Spleen associated tyrosine kinase.
    
 0.928
FIBCD1
Fibrinogen C domain containing 1.
    
 0.901
ENSCAPP00000004047
annotation not available
  
 0.887
ENSCAPP00000001061
annotation not available
    
  0.857
CLDN18
Claudin 18.
      
 0.838
ZAP70
Zeta chain of T cell receptor associated protein kinase 70.
    
 0.832
MRC1
Mannose receptor C-type 1.
    
 0.784
CBLB
Cbl proto-oncogene B.
     
  0.755
ENSCAPP00000013675
annotation not available
     
  0.755
PTPN6
Protein tyrosine phosphatase non-receptor type 6.
    
  0.742
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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