STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RUBCNRubicon autophagy regulator. (965 aa)    
Predicted Functional Partners:
ENSCAPP00000005383
annotation not available
    
 
 0.948
PIK3C3
Phosphatidylinositol 3-kinase catalytic subunit type 3.
    
 
 0.943
RAB7A
RAB7A, member RAS oncogene family.
    
 
 0.864
PIK3R4
Phosphoinositide-3-kinase regulatory subunit 4.
    
 
 0.787
ENSCAPP00000003907
annotation not available
   
 0.742
ENSCAPP00000009882
annotation not available
   
 0.742
ATG14
Autophagy related 14.
    
 
 0.654
ENSCAPP00000010142
annotation not available
    
 
 0.563
GABARAPL2
GABA type A receptor associated protein like 2.
    
 
 0.563
ENSCAPP00000017351
annotation not available
    
 
 0.563
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.