Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FAM219AFamily with sequence similarity 219 member A. (165 aa)    
Predicted Functional Partners:
GPR37L1
G protein-coupled receptor 37 like 1.
    
   0.862
GATAD2A
GATA zinc finger domain containing 2A.
    
   0.841
ENSCAPP00000005542
annotation not available
    
   0.830
ENSCAPP00000005433
annotation not available
    
 
 0.764
GATAD2B
GATA zinc finger domain containing 2B.
    
   0.622
ENSCAPP00000006755
annotation not available
      
 0.579
ELP1
Elongator complex protein 1.
    
   0.511
ENSCAPP00000007273
annotation not available
      
 0.498
MBD3
methyl-CpG binding domain protein 3.
    
   0.490
MBD2
methyl-CpG binding domain protein 2.
    
   0.490
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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