Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005687annotation not available (234 aa)    
Predicted Functional Partners:
OTUB1
OTU deubiquitinase, ubiquitin aldehyde binding 1.
    
 0.959
S100Z
S100 calcium binding protein Z.
      
 0.905
OTUB2
OTU deubiquitinase, ubiquitin aldehyde binding 2.
    
 0.808
USP8
Ubiquitin specific peptidase 8.
    
 0.808
TBK1
TANK binding kinase 1.
    
 
 0.743
KCNV2
Potassium voltage-gated channel modifier subfamily V member 2.
    
 
 0.738
TP53
Tumor protein p53.
    
   0.695
NDUFAF6
NADH:ubiquinone oxidoreductase complex assembly factor 6.
      
 0.680
PPP1CB
Protein phosphatase 1 catalytic subunit beta.
      
 0.669
PNPLA8
Patatin like phospholipase domain containing 8.
      
 0.659
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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