Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005688annotation not available (158 aa)    
Predicted Functional Partners:
MICALL2
MICAL like 2.
    
 0.983
RAB8B
RAB8B, member RAS oncogene family.
   
  0.972
RABIF
RAB interacting factor.
    
 
 0.958
GDI1
GDP dissociation inhibitor 1.
    
 0.916
GDI2
GDP dissociation inhibitor 2.
    
 0.916
RAB8A
RAB8A, member RAS oncogene family.
   
  0.915
MICALL1
MICAL like 1.
    
 0.873
RAB14
RAB14, member RAS oncogene family.
   
 0.873
PRKACA
Protein kinase cAMP-activated catalytic subunit alpha.
     
 0.862
PRKACB
Protein kinase cAMP-activated catalytic subunit beta.
     
 0.862
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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