STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005690annotation not available (210 aa)    
Predicted Functional Partners:
ENSCAPP00000001731
annotation not available
 
      0.814
SNAPC4
Small nuclear RNA activating complex polypeptide 4.
    
  0.606
ENSCAPP00000001526
annotation not available
    
 0.536
SALL3
Spalt like transcription factor 3.
    
 0.536
SALL4
Spalt like transcription factor 4.
    
 0.536
GTF2B
General transcription factor IIB.
    
 0.529
GTF2E1
General transcription factor IIE subunit 1.
    
  0.515
POU2AF1
POU class 2 homeobox associating factor 1.
    
 
 0.514
TBP
TATA-box binding protein.
    
 0.502
ENSCAPP00000015721
annotation not available
    
 0.502
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.