close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING newly available directed regulatory networks a new typed view showing functional, physical, and regulatory edges in one network new clustering options and cluster-based layouts … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKZF1Ankyrin repeat and zinc finger peptidyl tRNA hydrolase 1. (492 aa)    
Predicted Functional Partners:
VCP
Valosin containing protein.
   
 0.996
TOMM70
Translocase of outer mitochondrial membrane 70.
     
 0.915
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
    
 0.877
ENSCAPP00000016289
annotation not available
    
 0.877
ENSCAPP00000008030
annotation not available
     
 0.795
TOMM40
Translocase of outer mitochondrial membrane 40.
     
 0.795
ENSCAPP00000017181
annotation not available
    
 0.752
ENSCAPP00000009878
annotation not available
    
   0.751
ENSCAPP00000016796
annotation not available
    
   0.751
SLC39A1
Solute carrier family 39 member 1.
   
 
  0.747
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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