KRT39 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

KRT39

Keratin 39. (482 aa)

Predicted Functional Partners:

ENSCAPP00000012310

0.484

KRT27

0.465

KRT23

0.464

KRT24

0.461

KRT36

0.457

ENSCAPP00000018044

0.448

ENSCAPP00000012516

0.447

ENSCAPP00000009221

0.445

PPL

0.412

KRT35

0.407

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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... functional annotations:

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSCAPP00000009221	KRT27	ENSCAPP00000009221	ENSCAPP00000011615	annotation not available	Keratin 27.	0.415
ENSCAPP00000009221	KRT39	ENSCAPP00000009221	ENSCAPP00000005703	annotation not available	Keratin 39.	0.445
ENSCAPP00000012310	KRT27	ENSCAPP00000012310	ENSCAPP00000011615	annotation not available	Keratin 27.	0.428
ENSCAPP00000012310	KRT39	ENSCAPP00000012310	ENSCAPP00000005703	annotation not available	Keratin 39.	0.484
ENSCAPP00000012516	KRT27	ENSCAPP00000012516	ENSCAPP00000011615	annotation not available	Keratin 27.	0.415
ENSCAPP00000012516	KRT39	ENSCAPP00000012516	ENSCAPP00000005703	annotation not available	Keratin 39.	0.447
ENSCAPP00000018044	KRT27	ENSCAPP00000018044	ENSCAPP00000011615	annotation not available	Keratin 27.	0.420
ENSCAPP00000018044	KRT39	ENSCAPP00000018044	ENSCAPP00000005703	annotation not available	Keratin 39.	0.448
KRT23	KRT27	ENSCAPP00000005978	ENSCAPP00000011615	Keratin 23.	Keratin 27.	0.467
KRT23	KRT35	ENSCAPP00000005978	ENSCAPP00000007409	Keratin 23.	Keratin 35.	0.413
KRT23	KRT36	ENSCAPP00000005978	ENSCAPP00000014709	Keratin 23.	Keratin 36.	0.443
KRT23	KRT39	ENSCAPP00000005978	ENSCAPP00000005703	Keratin 23.	Keratin 39.	0.464
KRT24	KRT27	ENSCAPP00000004488	ENSCAPP00000011615	Keratin 24.	Keratin 27.	0.505
KRT24	KRT35	ENSCAPP00000004488	ENSCAPP00000007409	Keratin 24.	Keratin 35.	0.409
KRT24	KRT39	ENSCAPP00000004488	ENSCAPP00000005703	Keratin 24.	Keratin 39.	0.461
KRT27	ENSCAPP00000009221	ENSCAPP00000011615	ENSCAPP00000009221	Keratin 27.	annotation not available	0.415
KRT27	ENSCAPP00000012310	ENSCAPP00000011615	ENSCAPP00000012310	Keratin 27.	annotation not available	0.428
KRT27	ENSCAPP00000012516	ENSCAPP00000011615	ENSCAPP00000012516	Keratin 27.	annotation not available	0.415
KRT27	ENSCAPP00000018044	ENSCAPP00000011615	ENSCAPP00000018044	Keratin 27.	annotation not available	0.420
KRT27	KRT23	ENSCAPP00000011615	ENSCAPP00000005978	Keratin 27.	Keratin 23.	0.467