STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GPR171G protein-coupled receptor 171. (319 aa)    
Predicted Functional Partners:
ACADVL
acyl-CoA dehydrogenase very long chain.
    
   0.763
LARP6
La ribonucleoprotein 6, translational regulator.
    
   0.763
GPR22
G protein-coupled receptor 22.
      
 0.572
GPR142
G protein-coupled receptor 142.
      
 0.528
FAM81A
Family with sequence similarity 81 member A.
      
 0.511
ACAD9
acyl-CoA dehydrogenase family member 9.
    
   0.497
ENSCAPP00000000787
annotation not available
      
 0.473
TRAT1
T cell receptor associated transmembrane adaptor 1.
   
  
 0.472
ENSCAPP00000012146
annotation not available
      
 0.463
LEPR
Leptin receptor.
      
 0.454
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.