Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SEC22ASEC22 homolog A, vesicle trafficking protein. (265 aa)    
Predicted Functional Partners:
ENSCAPP00000003668
annotation not available
    
 0.976
ENSCAPP00000003732
annotation not available
   
 0.976
STX18
Syntaxin 18.
   
 0.973
ENSCAPP00000010370
annotation not available
    
 0.972
STX5
Syntaxin 5.
   
 0.972
ENSCAPP00000011016
annotation not available
    
 0.952
ENSCAPP00000000230
annotation not available
   
 0.945
USE1
Unconventional SNARE in the ER 1.
    
 0.944
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
    
 0.943
STX6
Syntaxin 6.
    
 0.931
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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