STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CHST10Carbohydrate sulfotransferase 10. (366 aa)    
Predicted Functional Partners:
B3GAT1
Beta-1,3-glucuronyltransferase 1.
     
 0.949
DAG1
Dystroglycan 1.
     
 0.926
B3GAT3
Beta-1,3-glucuronyltransferase 3.
     
 0.808
ENSCAPP00000011959
annotation not available
      
 0.716
ENSCAPP00000010504
annotation not available
      
 0.624
RPL31
Ribosomal protein L31.
      
 0.624
USP40
Ubiquitin specific peptidase 40.
      
 0.611
ENSCAPP00000007340
annotation not available
      
 0.584
ENSCAPP00000011397
annotation not available
      
 0.584
ITIH2
Inter-alpha-trypsin inhibitor heavy chain 2.
      
 0.582
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.