Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
XYLBXylulokinase. (500 aa)    
Predicted Functional Partners:
ENSCAPP00000006160
annotation not available
   
 0.979
SORD
Sorbitol dehydrogenase.
  
 
 0.962
AGL
Amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase.
  
   0.896
GPD2
Glycerol-3-phosphate dehydrogenase 2.
  
 
 0.876
ENSCAPP00000011129
annotation not available
    
 0.855
TKTL2
Transketolase like 2.
  
 
 0.837
TKTL1
Transketolase like 1.
  
 
 0.837
TKT
Transketolase.
  
 
 0.837
ENSCAPP00000001220
annotation not available
    
   0.833
ENSCAPP00000007435
annotation not available
    
   0.821
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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