NIBAN2 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

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[Homology]

Score

NIBAN2

Niban apoptosis regulator 2. (718 aa)

Predicted Functional Partners:

MYSM1

0.878

KEAP1

0.856

TMEM120B

0.825

ENSCAPP00000017843

0.773

ENSCAPP00000000270

0.747

ENSCAPP00000006586

0.747

ENSCAPP00000013350

0.747

WDR90

0.670

ITSN2

0.661

ACTL6A

0.649

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ACTL6A	ENSCAPP00000000270	ENSCAPP00000013540	ENSCAPP00000000270	Actin like 6A.	annotation not available	0.986
ACTL6A	ENSCAPP00000006586	ENSCAPP00000013540	ENSCAPP00000006586	Actin like 6A.	annotation not available	0.986
ACTL6A	ENSCAPP00000013350	ENSCAPP00000013540	ENSCAPP00000013350	Actin like 6A.	annotation not available	0.986
ACTL6A	ITSN2	ENSCAPP00000013540	ENSCAPP00000009309	Actin like 6A.	Intersectin 2.	0.674
ACTL6A	MYSM1	ENSCAPP00000013540	ENSCAPP00000004064	Actin like 6A.	Myb like, SWIRM and MPN domains 1.	0.947
ACTL6A	NIBAN2	ENSCAPP00000013540	ENSCAPP00000005718	Actin like 6A.	Niban apoptosis regulator 2.	0.649
ACTL6A	WDR90	ENSCAPP00000013540	ENSCAPP00000018448	Actin like 6A.	WD repeat domain 90.	0.612
ENSCAPP00000000270	ACTL6A	ENSCAPP00000000270	ENSCAPP00000013540	annotation not available	Actin like 6A.	0.986
ENSCAPP00000000270	ENSCAPP00000006586	ENSCAPP00000000270	ENSCAPP00000006586	annotation not available	annotation not available	0.811
ENSCAPP00000000270	ENSCAPP00000013350	ENSCAPP00000000270	ENSCAPP00000013350	annotation not available	annotation not available	0.811
ENSCAPP00000000270	MYSM1	ENSCAPP00000000270	ENSCAPP00000004064	annotation not available	Myb like, SWIRM and MPN domains 1.	0.812
ENSCAPP00000000270	NIBAN2	ENSCAPP00000000270	ENSCAPP00000005718	annotation not available	Niban apoptosis regulator 2.	0.747
ENSCAPP00000000270	WDR90	ENSCAPP00000000270	ENSCAPP00000018448	annotation not available	WD repeat domain 90.	0.558
ENSCAPP00000006586	ACTL6A	ENSCAPP00000006586	ENSCAPP00000013540	annotation not available	Actin like 6A.	0.986
ENSCAPP00000006586	ENSCAPP00000000270	ENSCAPP00000006586	ENSCAPP00000000270	annotation not available	annotation not available	0.811
ENSCAPP00000006586	ENSCAPP00000013350	ENSCAPP00000006586	ENSCAPP00000013350	annotation not available	annotation not available	0.983
ENSCAPP00000006586	MYSM1	ENSCAPP00000006586	ENSCAPP00000004064	annotation not available	Myb like, SWIRM and MPN domains 1.	0.805
ENSCAPP00000006586	NIBAN2	ENSCAPP00000006586	ENSCAPP00000005718	annotation not available	Niban apoptosis regulator 2.	0.747
ENSCAPP00000006586	WDR90	ENSCAPP00000006586	ENSCAPP00000018448	annotation not available	WD repeat domain 90.	0.558
ENSCAPP00000013350	ACTL6A	ENSCAPP00000013350	ENSCAPP00000013540	annotation not available	Actin like 6A.	0.986