TMEM68 protein (Cavia aperea) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

TMEM68

Transmembrane protein 68. (329 aa)

Predicted Functional Partners:

PLA2G4A

0.703

ENSCAPP00000016271

0.652

EPHX2

0.646

MBOAT2

0.644

ENSCAPP00000007382

0.577

PSAT1

0.566

ENSCAPP00000015353

0.566

DOLK

0.564

GPD1L

0.563

GPD1

0.563

Your Current Organism:

Cavia aperea

NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DOLK	MBOAT2	ENSCAPP00000005742	ENSCAPP00000003379	Dolichol kinase.	Membrane bound O-acyltransferase domain containing 2.	0.817
DOLK	TMEM68	ENSCAPP00000005742	ENSCAPP00000005724	Dolichol kinase.	Transmembrane protein 68.	0.564
ENSCAPP00000007382	ENSCAPP00000015353	ENSCAPP00000007382	ENSCAPP00000015353	annotation not available	annotation not available	0.620
ENSCAPP00000007382	ENSCAPP00000016271	ENSCAPP00000007382	ENSCAPP00000016271	annotation not available	annotation not available	0.998
ENSCAPP00000007382	EPHX2	ENSCAPP00000007382	ENSCAPP00000005800	annotation not available	Epoxide hydrolase 2.	0.811
ENSCAPP00000007382	GPD1	ENSCAPP00000007382	ENSCAPP00000016540	annotation not available	Glycerol-3-phosphate dehydrogenase 1.	0.668
ENSCAPP00000007382	GPD1L	ENSCAPP00000007382	ENSCAPP00000010313	annotation not available	Glycerol-3-phosphate dehydrogenase 1 like.	0.668
ENSCAPP00000007382	TMEM68	ENSCAPP00000007382	ENSCAPP00000005724	annotation not available	Transmembrane protein 68.	0.577
ENSCAPP00000015353	ENSCAPP00000007382	ENSCAPP00000015353	ENSCAPP00000007382	annotation not available	annotation not available	0.620
ENSCAPP00000015353	ENSCAPP00000016271	ENSCAPP00000015353	ENSCAPP00000016271	annotation not available	annotation not available	0.919
ENSCAPP00000015353	TMEM68	ENSCAPP00000015353	ENSCAPP00000005724	annotation not available	Transmembrane protein 68.	0.566
ENSCAPP00000016271	ENSCAPP00000007382	ENSCAPP00000016271	ENSCAPP00000007382	annotation not available	annotation not available	0.998
ENSCAPP00000016271	ENSCAPP00000015353	ENSCAPP00000016271	ENSCAPP00000015353	annotation not available	annotation not available	0.919
ENSCAPP00000016271	EPHX2	ENSCAPP00000016271	ENSCAPP00000005800	annotation not available	Epoxide hydrolase 2.	0.929
ENSCAPP00000016271	GPD1	ENSCAPP00000016271	ENSCAPP00000016540	annotation not available	Glycerol-3-phosphate dehydrogenase 1.	0.838
ENSCAPP00000016271	GPD1L	ENSCAPP00000016271	ENSCAPP00000010313	annotation not available	Glycerol-3-phosphate dehydrogenase 1 like.	0.838
ENSCAPP00000016271	TMEM68	ENSCAPP00000016271	ENSCAPP00000005724	annotation not available	Transmembrane protein 68.	0.652
EPHX2	ENSCAPP00000007382	ENSCAPP00000005800	ENSCAPP00000007382	Epoxide hydrolase 2.	annotation not available	0.811
EPHX2	ENSCAPP00000016271	ENSCAPP00000005800	ENSCAPP00000016271	Epoxide hydrolase 2.	annotation not available	0.929
EPHX2	MBOAT2	ENSCAPP00000005800	ENSCAPP00000003379	Epoxide hydrolase 2.	Membrane bound O-acyltransferase domain containing 2.	0.850