Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM68Transmembrane protein 68. (329 aa)    
Predicted Functional Partners:
ENSCAPP00000016086
annotation not available
      
 0.681
ENSCAPP00000012292
annotation not available
      
 0.657
CHCHD7
Coiled-coil-helix-coiled-coil-helix domain containing 7.
      
 0.650
ENSCAPP00000014442
annotation not available
      
 0.614
RPUSD4
RNA pseudouridine synthase D4.
     
 0.589
ENSCAPP00000006908
annotation not available
      
 0.584
SLC16A4
Solute carrier family 16 member 4.
    
 
 0.580
ENSCAPP00000016271
annotation not available
   
 0.557
TGS1
Trimethylguanosine synthase 1.
   
  
 0.551
ASB2
Ankyrin repeat and SOCS box containing 2.
    
 
 0.539
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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