Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
F9Coagulation factor IX. (282 aa)    
Predicted Functional Partners:
GGCX
Gamma-glutamyl carboxylase.
    
 0.984
F3
Coagulation factor III, tissue factor.
    
 0.982
SERPINC1
Serpin family C member 1.
  
 0.974
F7
Coagulation factor VII.
   
 0.839
F2
Coagulation factor II, thrombin.
   
 0.837
F10
Coagulation factor X.
   
 0.813
F11
Coagulation factor XI.
  
0.768
PLAU
Plasminogen activator, urokinase.
  
 
0.761
MBL2
Mannose binding lectin 2.
   
 0.747
SERPINA10
Serpin family A member 10.
  
 0.727
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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