STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ATG4CAutophagy related 4C cysteine peptidase. (453 aa)    
Predicted Functional Partners:
ENSCAPP00000010142
annotation not available
   
 0.985
GABARAPL2
GABA type A receptor associated protein like 2.
   
 0.983
ENSCAPP00000017351
annotation not available
   
 0.983
ATG4B
Autophagy related 4B cysteine peptidase.
    
 0.943
ATG3
Autophagy related 3.
   
 
 0.897
ATG7
Autophagy related 7.
   
 
 0.809
ULK2
Unc-51 like autophagy activating kinase 2.
   
 
 0.802
ULK1
Unc-51 like autophagy activating kinase 1.
   
 
 0.802
ATG4D
Autophagy related 4D cysteine peptidase.
    
 0.784
ATG12
Autophagy related 12.
    
 
 0.720
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.