Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
SLC6A15Solute carrier family 6 member 15. (678 aa)    
Predicted Functional Partners:
ENSCAPP00000015859
annotation not available
 
 
  0.630
STX1B
Syntaxin 1B.
   
 0.567
PPFIA3
PTPRF interacting protein alpha 3.
   
  
 0.562
STX1A
Syntaxin 1A.
   
 0.548
STX3
Syntaxin 3.
    
 0.539
STX2
Syntaxin 2.
    
 0.539
STX4
Syntaxin 4.
    
 0.539
SLC6A1
Solute carrier family 6 member 1.
  
 
 
0.536
CAMK2G
Calcium/calmodulin dependent protein kinase II gamma.
     
  0.519
ENSCAPP00000001641
annotation not available
      
 0.511
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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