Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ENSCAPP00000005755annotation not available (29 aa)    
Predicted Functional Partners:
VANGL2
VANGL planar cell polarity protein 2.
    
 0.605
VANGL1
VANGL planar cell polarity protein 1.
    
 0.605
DVL2
Dishevelled segment polarity protein 2.
    
 0.555
DVL3
Dishevelled segment polarity protein 3.
    
 0.555
DVL1
Dishevelled segment polarity protein 1.
    
 0.555
AFDN
Afadin, adherens junction formation factor.
    
  0.510
MYO3B
Myosin IIIB.
    
 0.470
ENSCAPP00000003807
annotation not available
    
 0.470
ENSCAPP00000008321
annotation not available
    
 0.470
ENSCAPP00000015484
annotation not available
    
 0.470
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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