STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GTF3C6General transcription factor IIIC subunit 6. (164 aa)    
Predicted Functional Partners:
GTF3C5
General transcription factor IIIC subunit 5.
   
 0.982
GTF3C4
General transcription factor IIIC subunit 4.
    
 0.978
GTF3C1
General transcription factor IIIC subunit 1.
    
 0.969
GTF3C3
General transcription factor IIIC subunit 3.
    
 0.962
GTF3C2
General transcription factor IIIC subunit 2.
    
 0.949
ZNF512
Zinc finger protein 512.
    
 0.768
ZNF512B
Zinc finger protein 512B.
    
 0.768
SERBP1
SERPINE1 mRNA binding protein 1.
      
 0.559
GUCY2C
Guanylate cyclase 2C.
      
 0.558
RPF2
Ribosome production factor 2 homolog.
 
    
 0.456
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.