Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CHPF2Chondroitin polymerizing factor 2. (772 aa)    
Predicted Functional Partners:
CHSY1
Chondroitin sulfate synthase 1.
   
 0.968
CHSY3
Chondroitin sulfate synthase 3.
    
 0.966
CSGALNACT2
Chondroitin sulfate N-acetylgalactosaminyltransferase 2.
   
 0.943
CSGALNACT1
Chondroitin sulfate N-acetylgalactosaminyltransferase 1.
    
 0.943
CHPF
Chondroitin polymerizing factor.
   
 
  0.916
MDN1
Midasin AAA ATPase 1.
     
 0.616
SDF2
Stromal cell derived factor 2.
      
 0.616
EXOSC10
Exosome component 10.
    
   0.583
MOGS
Mannosyl-oligosaccharide glucosidase.
   
  
 0.579
HEPACAM
Hepatic and glial cell adhesion molecule.
      
 0.570
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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