STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIPFLipase F, gastric type. (338 aa)    
Predicted Functional Partners:
DGAT1
Diacylglycerol O-acyltransferase 1.
     
 0.913
PNLIP
Pancreatic lipase.
     
 0.911
PNLIPRP2
Pancreatic lipase related protein 2 (gene/pseudogene).
     
 0.911
LIPC
Lipase C, hepatic type.
     
 0.904
MOGAT1
Monoacylglycerol O-acyltransferase 1.
     
 0.899
ENSCAPP00000000537
annotation not available
     
 0.896
CYP7A1
Cytochrome P450 family 7 subfamily A member 1.
   
 0.892
LPL
Lipoprotein lipase.
     
 0.890
ENSCAPP00000009186
annotation not available
    
 0.889
PNPLA2
Patatin like phospholipase domain containing 2.
    
 0.883
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.