Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
PLEKHA3Pleckstrin homology domain containing A3. (293 aa)    
Predicted Functional Partners:
GLTP
Glycolipid transfer protein.
      
 0.691
SNF8
SNF8 subunit of ESCRT-II.
   
    0.691
CEL
Carboxyl ester lipase.
      
 0.687
CFAP65
Cilia and flagella associated protein 65.
      
 0.687
SEC24D
SEC24 homolog D, COPII coat complex component.
    
   0.666
PLEKHA8
Pleckstrin homology domain containing A8.
    
  0.653
OSBP
Oxysterol binding protein.
    
 
 0.641
ENSCAPP00000011347
annotation not available
      
 0.619
SEC24B
SEC24 homolog B, COPII coat complex component.
   
 
 0.592
ARF1
ADP ribosylation factor 1.
    
 0.587
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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