STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBP1Upstream binding protein 1. (346 aa)    
Predicted Functional Partners:
TFCP2
Transcription factor CP2.
  
 
  
0.755
TFCP2L1
Transcription factor CP2 like 1.
  
 
  
0.570
ANKRD29
Ankyrin repeat domain 29.
    
   0.532
MTHFD2
annotation not available
    
   0.474
ESRRB
Estrogen related receptor beta.
    
 
 0.429
RING1
Ring finger protein 1.
    
 
 0.409
ENSCAPP00000009463
annotation not available
    
 
 0.408
ENSCAPP00000018370
annotation not available
    
 
 0.408
HINT3
Histidine triad nucleotide binding protein 3.
   
  0.401
Your Current Organism:
Cavia aperea
NCBI taxonomy Id: 37548
Other names: Brazilian guinea pig, C. aperea
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.